WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A11.2.1 Sequence Name  F32A11.2.1
Length (nt)  1642   Chromosome Location  II: 13153464-13157047
Chromosome . Primary Identifier  II Chromosome Location . Start  13153464
Chromosome Location . End  13157047 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001998 hpr-17 F32A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A11.2 F32A11.2 1545   II: 13153548-13153833

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A11.2.1 13153464 13157047 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72938   370   II: 13153464-13153833 Caenorhabditis elegans
Exon72939   124   II: 13153890-13154013 Caenorhabditis elegans
Exon72940   187   II: 13154060-13154246 Caenorhabditis elegans
Exon72941   426   II: 13155363-13155788 Caenorhabditis elegans
Exon72942   350   II: 13156411-13156760 Caenorhabditis elegans
Exon72943   82   II: 13156812-13156893 Caenorhabditis elegans
Exon72944   103   II: 13156945-13157047 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A11.2.1 13153464 13157047 -1

1 Sequence

Length
1642

1 Sequence Ontology Term

Identifier Name Description
transcript