WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y48E1C.1b Sequence Name  Y48E1C.1b
Length (nt)  4424   Chromosome Location  II: 13415025-13424446
Chromosome . Primary Identifier  II Chromosome Location . Start  13415025
Chromosome Location . End  13424446 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1C.1b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013014 Y48E1C.1 Y48E1C.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48E1C.1b 13415025 13424446 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73256   62   II: 13415025-13415086 Caenorhabditis elegans
Exon73260   53   II: 13415857-13415909 Caenorhabditis elegans
Exon73261   3232   II: 13416028-13419259 Caenorhabditis elegans
Exon73266   507   II: 13420328-13420834 Caenorhabditis elegans
Exon73270   120   II: 13422219-13422338 Caenorhabditis elegans
Exon73274   112   II: 13422394-13422505 Caenorhabditis elegans
Exon73278   136   II: 13422556-13422691 Caenorhabditis elegans
Exon73281   202   II: 13424245-13424446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48E1C.1b 13415025 13424446 1

1 Sequence

Length
4424

1 Sequence Ontology Term

Identifier Name Description
transcript