WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48E1B.3a Sequence Name  Y48E1B.3a
Length (nt)  1083   Chromosome Location  II: 13547935-13548065
Chromosome . Primary Identifier  II Chromosome Location . Start  13547935
Chromosome Location . End  13548065
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22159 Y48E1B.3, isoform a 40.3 360 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056917
WBRNAi00037254

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.3a 13547935 13548065 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013002 Y48E1B.3 Y48E1B.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.3a 13547935 13548065 -1
CDS:Y48E1B.3a 13550085 13550575 -1
CDS:Y48E1B.3a 13553222 13553399 -1
CDS:Y48E1B.3a 13564666 13564787 -1
CDS:Y48E1B.3a 13567752 13567863 -1
CDS:Y48E1B.3a 13567918 13567966 -1

1 Sequence

Length
1083

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48E1B.3a.1 Y48E1B.3a.1 1284   II: 13547739-13567971