WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W07G1.5a Sequence Name  W07G1.5a
Length (nt)  1317   Chromosome Location  II: 13959239-13959293
Chromosome . Primary Identifier  II Chromosome Location . Start  13959239
Chromosome Location . End  13959293
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07G1.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35636 RPI-1, isoform a 47.5 438 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054958
WBRNAi00019703
WBRNAi00036363

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W07G1.5a 13959239 13959293 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012332 rpi-1 W07G1.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:W07G1.5a 13959239 13959293 -1
CDS:W07G1.5a 13960884 13961129 -1
CDS:W07G1.5a 13961266 13961981 -1
CDS:W07G1.5a 13962031 13962177 -1
CDS:W07G1.5a 13962228 13962380 -1

1 Sequence

Length
1317

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W07G1.5a.1 W07G1.5a.1 1467   II: 13959126-13962417