WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48B6A.8.1 Sequence Name  Y48B6A.8.1
Length (nt)  2200   Chromosome Location  II: 14205635-14210214
Chromosome . Primary Identifier  II Chromosome Location . Start  14205635
Chromosome Location . End  14210214 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.8 Y48B6A.8 1824   II: 14205682-14205753

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.8.1 14205635 14210214 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74344   119   II: 14205635-14205753 Caenorhabditis elegans
Exon74345   101   II: 14205811-14205911 Caenorhabditis elegans
Exon74347   222   II: 14206671-14206892 Caenorhabditis elegans
Exon74348   327   II: 14206952-14207278 Caenorhabditis elegans
Exon74349   660   II: 14207523-14208182 Caenorhabditis elegans
Exon74351   159   II: 14208719-14208877 Caenorhabditis elegans
Exon74352   185   II: 14208922-14209106 Caenorhabditis elegans
Exon74353   427   II: 14209788-14210214 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.8.1 14205635 14210214 1

1 Sequence

Length
2200

1 Sequence Ontology Term

Identifier Name Description
transcript