WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G11A.13a.1 Sequence Name  Y54G11A.13a.1
Length (nt)  1631   Chromosome Location  II: 14307798-14310779
Chromosome . Primary Identifier  II Chromosome Location . Start  14307798
Chromosome Location . End  14310779 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G11A.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013220 ctl-3 Y54G11A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G11A.13a Y54G11A.13a 1539   II: 14307854-14308375

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.13a.1 14307798 14310779 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74446   578   II: 14307798-14308375 Caenorhabditis elegans
Exon74448   273   II: 14309389-14309661 Caenorhabditis elegans
Exon74450   645   II: 14309716-14310360 Caenorhabditis elegans
Exon74453   68   II: 14310421-14310488 Caenorhabditis elegans
Exon74454   67   II: 14310713-14310779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.13a.1 14307798 14310779 -1

1 Sequence

Length
1631

1 Sequence Ontology Term

Identifier Name Description
transcript