WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26H11.2i.1 Sequence Name  F26H11.2i.1
Length (nt)  5116   Chromosome Location  II: 14390713-14401127
Chromosome . Primary Identifier  II Chromosome Location . Start  14390713
Chromosome Location . End  14401127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26H11.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009180 nurf-1 F26H11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26H11.2i F26H11.2i 4860   II: 14390720-14391012

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26H11.2i.1 14390713 14401127 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74617   300   II: 14390713-14391012 Caenorhabditis elegans
Exon74630   657   II: 14391684-14392340 Caenorhabditis elegans
Exon74642   85   II: 14392439-14392523 Caenorhabditis elegans
Exon74655   263   II: 14392584-14392846 Caenorhabditis elegans
Exon74667   272   II: 14394227-14394498 Caenorhabditis elegans
Exon74680   322   II: 14394686-14395007 Caenorhabditis elegans
Exon74694   433   II: 14395322-14395754 Caenorhabditis elegans
Exon74708   225   II: 14395808-14396032 Caenorhabditis elegans
Exon74721   335   II: 14396075-14396409 Caenorhabditis elegans
Exon74741   132   II: 14397091-14397222 Caenorhabditis elegans
Exon74749   336   II: 14397686-14398021 Caenorhabditis elegans
Exon74762   328   II: 14398622-14398949 Caenorhabditis elegans
Exon74777   453   II: 14399048-14399500 Caenorhabditis elegans
Exon74795   474   II: 14400058-14400531 Caenorhabditis elegans
Exon74813   171   II: 14400581-14400751 Caenorhabditis elegans
Exon74834   330   II: 14400798-14401127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26H11.2i.1 14390713 14401127 1

1 Sequence

Length
5116

1 Sequence Ontology Term

Identifier Name Description
transcript