WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C2.5a.1 Sequence Name  F57C2.5a.1
Length (nt)  1307   Chromosome Location  II: 14526220-14528239
Chromosome . Primary Identifier  II Chromosome Location . Start  14526220
Chromosome Location . End  14528239 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010197 F57C2.5 F57C2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C2.5a F57C2.5a 1176   II: 14526332-14526567

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57C2.5a.1 14526220 14528239 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75175   348   II: 14526220-14526567 Caenorhabditis elegans
Exon75178   54   II: 14526785-14526838 Caenorhabditis elegans
Exon75182   414   II: 14527018-14527431 Caenorhabditis elegans
Exon75185   431   II: 14527695-14528125 Caenorhabditis elegans
Exon75186   60   II: 14528180-14528239 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57C2.5a.1 14526220 14528239 -1

1 Sequence

Length
1307

1 Sequence Ontology Term

Identifier Name Description
transcript