WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F9.3c.1 Sequence Name  C09F9.3c.1
Length (nt)  2427   Chromosome Location  II: 14720552-14728016
Chromosome . Primary Identifier  II Chromosome Location . Start  14720552
Chromosome Location . End  14728016 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F9.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007480 glna-1 C09F9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F9.3c C09F9.3c 2427   II: 14720552-14720591

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3c.1 14720552 14728016 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75854   40   II: 14720552-14720591 Caenorhabditis elegans
Exon75857   53   II: 14720732-14720784 Caenorhabditis elegans
Exon75863   353   II: 14721397-14721749 Caenorhabditis elegans
Exon75869   125   II: 14722129-14722253 Caenorhabditis elegans
Exon75876   153   II: 14722303-14722455 Caenorhabditis elegans
Exon75883   185   II: 14722708-14722892 Caenorhabditis elegans
Exon75890   249   II: 14723222-14723470 Caenorhabditis elegans
Exon75897   210   II: 14723600-14723809 Caenorhabditis elegans
Exon75903   106   II: 14724840-14724945 Caenorhabditis elegans
Exon75912   151   II: 14725167-14725317 Caenorhabditis elegans
Exon75919   374   II: 14725490-14725863 Caenorhabditis elegans
Exon75926   307   II: 14727198-14727504 Caenorhabditis elegans
Exon75931   121   II: 14727896-14728016 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3c.1 14720552 14728016 -1

1 Sequence

Length
2427

1 Sequence Ontology Term

Identifier Name Description
transcript