WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05H10.6.1 Sequence Name  R05H10.6.1
Length (nt)  4424   Chromosome Location  II: 14843229-14850905
Chromosome . Primary Identifier  II Chromosome Location . Start  14843229
Chromosome Location . End  14850905 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05H10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05H10.6 R05H10.6 4095   II: 14843328-14843382

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05H10.6.1 14843229 14850905 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76109   154   II: 14843229-14843382 Caenorhabditis elegans
Exon76110   95   II: 14843827-14843921 Caenorhabditis elegans
Exon76111   147   II: 14845189-14845335 Caenorhabditis elegans
Exon76112   366   II: 14845384-14845749 Caenorhabditis elegans
Exon76113   327   II: 14845953-14846279 Caenorhabditis elegans
Exon76114   183   II: 14846368-14846550 Caenorhabditis elegans
Exon76115   1207   II: 14846799-14848005 Caenorhabditis elegans
Exon76116   158   II: 14848672-14848829 Caenorhabditis elegans
Exon76117   1406   II: 14848879-14850284 Caenorhabditis elegans
Exon76118   381   II: 14850525-14850905 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05H10.6.1 14843229 14850905 1

1 Sequence

Length
4424

1 Sequence Ontology Term

Identifier Name Description
transcript