WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46E12BL.4b Sequence Name  Y46E12BL.4b
Length (nt)  1059   Chromosome Location  II: 15207523-15207571
Chromosome . Primary Identifier  II Chromosome Location . Start  15207523
Chromosome Location . End  15207571
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46E12BL.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48790 SPSB-1, isoform b 39.6 352 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00056665

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y46E12BL.4b 15207523 15207571 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021597 spsb-1 Y46E12BL.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y46E12BL.4b 15207523 15207571 1
CDS:Y46E12BL.4b 15220192 15220445 1
CDS:Y46E12BL.4b 15222825 15223191 1
CDS:Y46E12BL.4b 15224724 15224815 1
CDS:Y46E12BL.4b 15226033 15226198 1
CDS:Y46E12BL.4b 15228289 15228419 1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46E12BL.4b.1 Y46E12BL.4b.1 2365   II: 15207523-15229725