WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H10E21.3a Sequence Name  H10E21.3a
Length (nt)  1461   Chromosome Location  III: 12189-12401
Chromosome . Primary Identifier  III Chromosome Location . Start  12189
Chromosome Location . End  12401
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H10E21.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28733 NHR-80, isoform a 55.1 486 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00049359
WBRNAi00064637
WBRNAi00016231
WBRNAi00033691
WBRNAi00107526
WBRNAi00065383
WBRNAi00065382
WBRNAi00065384
WBRNAi00049358
WBRNAi00002642
WBRNAi00002728
WBRNAi00065381
WBRNAi00065388
WBRNAi00111013
WBRNAi00091032
WBRNAi00065385
WBRNAi00065386
WBRNAi00065387
WBRNAi00049357
WBRNAi00090594
WBRNAi00107272
WBRNAi00111031
WBRNAi00107149
WBRNAi00092024

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H10E21.3a 12189 12401 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003670 nhr-80 H10E21.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:H10E21.3a 12189 12401 -1
CDS:H10E21.3a 12476 12627 -1
CDS:H10E21.3a 12965 13391 -1
CDS:H10E21.3a 13464 13682 -1
CDS:H10E21.3a 13812 14083 -1
CDS:H10E21.3a 14522 14686 -1
CDS:H10E21.3a 14741 14753 -1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H10E21.3a.1 H10E21.3a.1 1781   III: 11985-14869