WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42G9.5b Sequence Name  F42G9.5b
Length (nt)  1512   Chromosome Location  III: 774393-774523
Chromosome . Primary Identifier  III Chromosome Location . Start  774393
Chromosome Location . End  774523
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G9.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30790 ALH-11, isoform b 54.7 503 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047135
WBRNAi00014852
WBRNAi00006545
WBRNAi00032158

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42G9.5b 774393 774523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000117 alh-11 F42G9.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42G9.5b 774393 774523 -1
CDS:F42G9.5b 774574 774650 -1
CDS:F42G9.5b 774700 774937 -1
CDS:F42G9.5b 774986 775651 -1
CDS:F42G9.5b 775962 776222 -1
CDS:F42G9.5b 776861 776999 -1

1 Sequence

Length
1512

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42G9.5b.1 F42G9.5b.1 1589   III: 774322-777005
Transcript:F42G9.5b.2 F42G9.5b.2 1575   III: 774393-778871