WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06B10.4b.1 Sequence Name  R06B10.4b.1
Length (nt)  2661   Chromosome Location  III: 991881-1001895
Chromosome . Primary Identifier  III Chromosome Location . Start  991881
Chromosome Location . End  1001895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06B10.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006615 trp-2 R06B10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06B10.4b R06B10.4b 2661   III: 991881-992092

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R06B10.4b.1 991881 1001895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78813   212   III: 991881-992092 Caenorhabditis elegans
Exon78815   73   III: 992887-992959 Caenorhabditis elegans
Exon78817   99   III: 993330-993428 Caenorhabditis elegans
Exon78819   345   III: 994050-994394 Caenorhabditis elegans
Exon78821   183   III: 995001-995183 Caenorhabditis elegans
Exon78823   90   III: 995548-995637 Caenorhabditis elegans
Exon78825   145   III: 995720-995864 Caenorhabditis elegans
Exon78827   132   III: 996503-996634 Caenorhabditis elegans
Exon78829   140   III: 996860-996999 Caenorhabditis elegans
Exon78831   190   III: 997392-997581 Caenorhabditis elegans
Exon78833   88   III: 997666-997753 Caenorhabditis elegans
Exon78835   126   III: 998147-998272 Caenorhabditis elegans
Exon78837   245   III: 998748-998992 Caenorhabditis elegans
Exon78839   72   III: 999169-999240 Caenorhabditis elegans
Exon78841   78   III: 999285-999362 Caenorhabditis elegans
Exon78843   48   III: 999663-999710 Caenorhabditis elegans
Exon78844   42   III: 999779-999820 Caenorhabditis elegans
Exon78845   142   III: 1000515-1000656 Caenorhabditis elegans
Exon78848   129   III: 1001596-1001724 Caenorhabditis elegans
Exon78849   82   III: 1001814-1001895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R06B10.4b.1 991881 1001895 1

1 Sequence

Length
2661

1 Sequence Ontology Term

Identifier Name Description
transcript