WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71D11A.3b.1 Sequence Name  Y71D11A.3b.1
Length (nt)  1206   Chromosome Location  III: 1116525-1142850
Chromosome . Primary Identifier  III Chromosome Location . Start  1116525
Chromosome Location . End  1142850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71D11A.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022104 acsd-1 Y71D11A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71D11A.3b Y71D11A.3b 1206   III: 1116525-1116549

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71D11A.3b.1 1116525 1142850 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79101   25   III: 1116525-1116549 Caenorhabditis elegans
Exon79103   68   III: 1116992-1117059 Caenorhabditis elegans
Exon79105   83   III: 1117155-1117237 Caenorhabditis elegans
Exon79107   109   III: 1117287-1117395 Caenorhabditis elegans
Exon79110   132   III: 1122647-1122778 Caenorhabditis elegans
Exon79124   60   III: 1139070-1139129 Caenorhabditis elegans
Exon79126   102   III: 1139995-1140096 Caenorhabditis elegans
Exon79127   87   III: 1140365-1140451 Caenorhabditis elegans
Exon79129   366   III: 1141818-1142183 Caenorhabditis elegans
Exon79130   174   III: 1142677-1142850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71D11A.3b.1 1116525 1142850 1

1 Sequence

Length
1206

1 Sequence Ontology Term

Identifier Name Description
transcript