WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71D11A.5 Sequence Name  Y71D11A.5
Length (nt)  1527   Chromosome Location  III: 1125565-1125682
Chromosome . Primary Identifier  III Chromosome Location . Start  1125565
Chromosome Location . End  1125682
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71D11A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29908 LGC-46 58.4 508 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00009414
WBRNAi00058145
WBRNAi00026926
WBRNAi00071698
WBRNAi00006912
WBRNAi00085525
WBRNAi00037766

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71D11A.5 1125565 1125682 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022106 lgc-46 Y71D11A.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71D11A.5 1125565 1125682 -1
CDS:Y71D11A.5 1125810 1125896 -1
CDS:Y71D11A.5 1126930 1127255 -1
CDS:Y71D11A.5 1127721 1127851 -1
CDS:Y71D11A.5 1128879 1128990 -1
CDS:Y71D11A.5 1129249 1129366 -1
CDS:Y71D11A.5 1129826 1129928 -1
CDS:Y71D11A.5 1134098 1134302 -1
CDS:Y71D11A.5 1134392 1134460 -1
CDS:Y71D11A.5 1135208 1135300 -1
CDS:Y71D11A.5 1135392 1135500 -1
CDS:Y71D11A.5 1135912 1135967 -1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71D11A.5.1 Y71D11A.5.1 1920   III: 1125230-1136025