WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D2.1.1 Sequence Name  Y67D2.1.1
Length (nt)  1650   Chromosome Location  III: 1570306-1576638
Chromosome . Primary Identifier  III Chromosome Location . Start  1570306
Chromosome Location . End  1576638 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022051 rep-1 Y67D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D2.1 Y67D2.1 1533   III: 1570324-1570439

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D2.1.1 1570306 1576638 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79832   134   III: 1570306-1570439 Caenorhabditis elegans
Exon79834   70   III: 1571424-1571493 Caenorhabditis elegans
Exon79836   231   III: 1571544-1571774 Caenorhabditis elegans
Exon79838   152   III: 1572553-1572704 Caenorhabditis elegans
Exon79840   208   III: 1572800-1573007 Caenorhabditis elegans
Exon79842   179   III: 1573747-1573925 Caenorhabditis elegans
Exon79844   160   III: 1574227-1574386 Caenorhabditis elegans
Exon79846   97   III: 1574948-1575044 Caenorhabditis elegans
Exon79848   78   III: 1575094-1575171 Caenorhabditis elegans
Exon79854   128   III: 1576081-1576208 Caenorhabditis elegans
Exon79856   213   III: 1576426-1576638 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D2.1.1 1570306 1576638 1

1 Sequence

Length
1650

1 Sequence Ontology Term

Identifier Name Description
transcript