WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53A3.3a Sequence Name  F53A3.3a
Length (nt)  393   Chromosome Location  III: 1950676-1950771
Chromosome . Primary Identifier  III Chromosome Location . Start  1950676
Chromosome Location . End  1950771
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A3.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10884 RPS-15A, isoform a 14.7 130 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00095632
WBRNAi00094320
WBRNAi00066866
WBRNAi00002636
WBRNAi00094055
WBRNAi00094242
WBRNAi00091083
WBRNAi00093746
WBRNAi00075721
WBRNAi00075740
WBRNAi00075749
WBRNAi00075762
WBRNAi00032657
WBRNAi00025574
WBRNAi00008832
WBRNAi00048053
WBRNAi00075738
WBRNAi00094436
WBRNAi00079183
WBRNAi00079197
WBRNAi00079224
WBRNAi00075777

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53A3.3a 1950676 1950771 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004491 rps-15A F53A3.3 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53A3.3a 1950676 1950771 1
CDS:F53A3.3a 1951073 1951369 1

1 Sequence

Length
393

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53A3.3a.3 F53A3.3a.3 479   III: 1950535-1951423
Transcript:F53A3.3a.2 F53A3.3a.2 478   III: 1950535-1951423
Transcript:F53A3.3a.1 F53A3.3a.1 464   III: 1950660-1951424