WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M01E10.2b Sequence Name  M01E10.2b
Length (nt)  3285   Chromosome Location  III: 2035036-2035134
Chromosome . Primary Identifier  III Chromosome Location . Start  2035036
Chromosome Location . End  2035134
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E10.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46375 DPY-1, isoform b 119.3 1094 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00034350
WBRNAi00027420
WBRNAi00114942
WBRNAi00025974
WBRNAi00050749
WBRNAi00017099
WBRNAi00006538
WBRNAi00114988
WBRNAi00115026
WBRNAi00023278
WBRNAi00023541
WBRNAi00023789
WBRNAi00024076
WBRNAi00115083
WBRNAi00115064
WBRNAi00115045
WBRNAi00115002
WBRNAi00114967
WBRNAi00114961
WBRNAi00114979
WBRNAi00114910

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M01E10.2b 2035036 2035134 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001063 dpy-1 M01E10.2 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:M01E10.2b 2035036 2035134 -1
CDS:M01E10.2b 2036007 2036086 -1
CDS:M01E10.2b 2036134 2036277 -1
CDS:M01E10.2b 2036551 2036629 -1
CDS:M01E10.2b 2036679 2036753 -1
CDS:M01E10.2b 2036829 2036981 -1
CDS:M01E10.2b 2037880 2038284 -1
CDS:M01E10.2b 2039033 2039524 -1
CDS:M01E10.2b 2040291 2040353 -1
CDS:M01E10.2b 2040621 2040962 -1
CDS:M01E10.2b 2042029 2042108 -1
CDS:M01E10.2b 2042320 2042492 -1
CDS:M01E10.2b 2042541 2042770 -1
CDS:M01E10.2b 2042819 2043250 -1
CDS:M01E10.2b 2043686 2043970 -1
CDS:M01E10.2b 2044881 2045033 -1

1 Sequence

Length
3285

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M01E10.2b.1 M01E10.2b.1 3324   III: 2034997-2045033