WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y54F10AM.2b.1 Sequence Name  Y54F10AM.2b.1
Length (nt)  2273   Chromosome Location  III: 2549932-2560684
Chromosome . Primary Identifier  III Chromosome Location . Start  2549932
Chromosome Location . End  2560684 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10AM.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001410 feh-1 Y54F10AM.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54F10AM.2b Y54F10AM.2b 1923   III: 2549932-2549975

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.2b.1 2549932 2560684 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81447   44   III: 2549932-2549975 Caenorhabditis elegans
Exon81451   115   III: 2550070-2550184 Caenorhabditis elegans
Exon81454   136   III: 2555208-2555343 Caenorhabditis elegans
Exon81460   57   III: 2555877-2555933 Caenorhabditis elegans
Exon81467   378   III: 2556147-2556524 Caenorhabditis elegans
Exon81473   71   III: 2556608-2556678 Caenorhabditis elegans
Exon81480   272   III: 2557623-2557894 Caenorhabditis elegans
Exon81486   186   III: 2558001-2558186 Caenorhabditis elegans
Exon81492   450   III: 2558241-2558690 Caenorhabditis elegans
Exon81497   203   III: 2559269-2559471 Caenorhabditis elegans
Exon81507   361   III: 2560324-2560684 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54F10AM.2b.1 2549932 2560684 1

1 Sequence

Length
2273

1 Sequence Ontology Term

Identifier Name Description
transcript