WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54F10AM.2c Sequence Name  Y54F10AM.2c
Length (nt)  1665   Chromosome Location  III: 2555915-2555933
Chromosome . Primary Identifier  III Chromosome Location . Start  2555915
Chromosome Location . End  2555933
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10AM.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38648 FEH-1, isoform c 63.1 554 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057399
WBRNAi00063449
WBRNAi00063448

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54F10AM.2c 2555915 2555933 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001410 feh-1 Y54F10AM.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54F10AM.2c 2555915 2555933 1
CDS:Y54F10AM.2c 2556147 2556524 1
CDS:Y54F10AM.2c 2556608 2556678 1
CDS:Y54F10AM.2c 2557623 2557894 1
CDS:Y54F10AM.2c 2558001 2558186 1
CDS:Y54F10AM.2c 2558241 2558690 1
CDS:Y54F10AM.2c 2559269 2559476 1
CDS:Y54F10AM.2c 2560324 2560404 1

1 Sequence

Length
1665

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54F10AM.2c.2 Y54F10AM.2c.2 2233   III: 2550068-2560681
Transcript:Y54F10AM.2c.1 Y54F10AM.2c.1 2107   III: 2555208-2560672