WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71H2B.10 Sequence Name  Y71H2B.10
Length (nt)  2868   Chromosome Location  III: 2584206-2584277
Chromosome . Primary Identifier  III Chromosome Location . Start  2584206
Chromosome Location . End  2584277
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H2B.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29919 APB-1 105.2 955 Caenorhabditis elegans
 

Other

44 RNAi

WormBase ID
WBRNAi00009421
WBRNAi00058258
WBRNAi00085526
WBRNAi00101333
WBRNAi00094138
WBRNAi00098524
WBRNAi00098529
WBRNAi00098531
WBRNAi00098537
WBRNAi00098539
WBRNAi00098541
WBRNAi00098545
WBRNAi00098549
WBRNAi00098551
WBRNAi00098553
WBRNAi00098558
WBRNAi00098560
WBRNAi00098760
WBRNAi00060657
WBRNAi00060658
WBRNAi00033248
WBRNAi00000223
WBRNAi00002677
WBRNAi00026953
WBRNAi00115726
WBRNAi00060655
WBRNAi00060656
WBRNAi00098481
WBRNAi00098483
WBRNAi00108867

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71H2B.10 2584206 2584277 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000160 apb-1 Y71H2B.10 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71H2B.10 2584206 2584277 -1
CDS:Y71H2B.10 2584495 2584649 -1
CDS:Y71H2B.10 2585332 2585506 -1
CDS:Y71H2B.10 2589542 2589604 -1
CDS:Y71H2B.10 2590726 2591338 -1
CDS:Y71H2B.10 2592241 2593357 -1
CDS:Y71H2B.10 2595478 2595871 -1
CDS:Y71H2B.10 2596689 2596930 -1
CDS:Y71H2B.10 2596986 2597022 -1

1 Sequence

Length
2868

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71H2B.10.1 Y71H2B.10.1 3115   III: 2583971-2597034