WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H06I04.4a Sequence Name  H06I04.4a
Length (nt)  492   Chromosome Location  III: 3068335-3068467
Chromosome . Primary Identifier  III Chromosome Location . Start  3068335
Chromosome Location . End  3068467
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06I04.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20938 RPS-27A, isoform a 18.1 163 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00095659
WBRNAi00009382
WBRNAi00009383
WBRNAi00073161
WBRNAi00073163
WBRNAi00073162
WBRNAi00049327
WBRNAi00066903
WBRNAi00085518
WBRNAi00002678
WBRNAi00002680
WBRNAi00002701
WBRNAi00002711
WBRNAi00008917
WBRNAi00008918
WBRNAi00025789
WBRNAi00061464
WBRNAi00061465
WBRNAi00093740
WBRNAi00033676
WBRNAi00025788
WBRNAi00026821
WBRNAi00026822
WBRNAi00049323
WBRNAi00049324
WBRNAi00049325
WBRNAi00049326
WBRNAi00103416

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H06I04.4a 3068335 3068467 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006725 rps-27A H06I04.4 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:H06I04.4a 3068335 3068467 1
CDS:H06I04.4a 3068574 3068743 1
CDS:H06I04.4a 3068973 3069161 1

1 Sequence

Length
492

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H06I04.4a.2 H06I04.4a.2 558   III: 3068317-3069209
Transcript:H06I04.4a.1 H06I04.4a.1 559   III: 3068317-3069210