WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53G8AR.8a.1 Sequence Name  Y53G8AR.8a.1
Length (nt)  1503   Chromosome Location  III: 3290121-3294330
Chromosome . Primary Identifier  III Chromosome Location . Start  3290121
Chromosome Location . End  3294330 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AR.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021815 Y53G8AR.8 Y53G8AR.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53G8AR.8a Y53G8AR.8a 1368   III: 3290255-3290458

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AR.8a.1 3290121 3294330 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82710   338   III: 3290121-3290458 Caenorhabditis elegans
Exon82711   112   III: 3290503-3290614 Caenorhabditis elegans
Exon82713   563   III: 3291996-3292558 Caenorhabditis elegans
Exon82715   124   III: 3293684-3293807 Caenorhabditis elegans
Exon82717   166   III: 3293896-3294061 Caenorhabditis elegans
Exon82719   200   III: 3294131-3294330 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AR.8a.1 3290121 3294330 -1

1 Sequence

Length
1503

1 Sequence Ontology Term

Identifier Name Description
transcript