WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H7.6a.1 Sequence Name  F45H7.6a.1
Length (nt)  2688   Chromosome Location  III: 3377396-3384195
Chromosome . Primary Identifier  III Chromosome Location . Start  3377396
Chromosome Location . End  3384195 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009738 hecw-1 F45H7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H7.6a F45H7.6a 2625   III: 3377434-3377545

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.6a.1 3377396 3384195 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82914   150   III: 3377396-3377545 Caenorhabditis elegans
Exon82916   113   III: 3377592-3377704 Caenorhabditis elegans
Exon82918   90   III: 3377768-3377857 Caenorhabditis elegans
Exon82922   111   III: 3378413-3378523 Caenorhabditis elegans
Exon82924   147   III: 3378566-3378712 Caenorhabditis elegans
Exon82926   127   III: 3378758-3378884 Caenorhabditis elegans
Exon82928   249   III: 3379084-3379332 Caenorhabditis elegans
Exon82930   316   III: 3379777-3380092 Caenorhabditis elegans
Exon82932   302   III: 3380329-3380630 Caenorhabditis elegans
Exon82934   195   III: 3380852-3381046 Caenorhabditis elegans
Exon82936   83   III: 3381105-3381187 Caenorhabditis elegans
Exon82938   143   III: 3381230-3381372 Caenorhabditis elegans
Exon82940   83   III: 3381879-3381961 Caenorhabditis elegans
Exon82942   202   III: 3383008-3383209 Caenorhabditis elegans
Exon82944   192   III: 3383298-3383489 Caenorhabditis elegans
Exon82946   70   III: 3383608-3383677 Caenorhabditis elegans
Exon82949   115   III: 3384081-3384195 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.6a.1 3377396 3384195 -1

1 Sequence

Length
2688

1 Sequence Ontology Term

Identifier Name Description
transcript