WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34C12.3.1 Sequence Name  C34C12.3.1
Length (nt)  1672   Chromosome Location  III: 3461703-3467653
Chromosome . Primary Identifier  III Chromosome Location . Start  3461703
Chromosome Location . End  3467653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34C12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007922 pph-6 C34C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34C12.3 C34C12.3 996   III: 3461704-3461780

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34C12.3.1 3461703 3467653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83166   78   III: 3461703-3461780 Caenorhabditis elegans
Exon83167   90   III: 3462302-3462391 Caenorhabditis elegans
Exon83168   113   III: 3462448-3462560 Caenorhabditis elegans
Exon83169   103   III: 3464027-3464129 Caenorhabditis elegans
Exon83170   127   III: 3464187-3464313 Caenorhabditis elegans
Exon83171   132   III: 3465032-3465163 Caenorhabditis elegans
Exon83172   81   III: 3465855-3465935 Caenorhabditis elegans
Exon83173   130   III: 3466125-3466254 Caenorhabditis elegans
Exon83174   818   III: 3466836-3467653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34C12.3.1 3461703 3467653 1

1 Sequence

Length
1672

1 Sequence Ontology Term

Identifier Name Description
transcript