WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54C6.2 Sequence Name  C54C6.2
Length (nt)  1335   Chromosome Location  III: 3538326-3538501
Chromosome . Primary Identifier  III Chromosome Location . Start  3538326
Chromosome Location . End  3538501
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C6.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33770 BEN-1 49.4 444 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00074035
WBRNAi00074034
WBRNAi00074036
WBRNAi00074038
WBRNAi00072389
WBRNAi00074031
WBRNAi00074033
WBRNAi00074032
WBRNAi00074037
WBRNAi00012373
WBRNAi00076241
WBRNAi00006162
WBRNAi00007162
WBRNAi00030125
WBRNAi00077239
WBRNAi00066662
WBRNAi00043113
WBRNAi00043114
WBRNAi00072390

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54C6.2 3538326 3538501 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54C6.2 3538326 3538501 -1
CDS:C54C6.2 3539311 3539784 -1
CDS:C54C6.2 3539842 3540004 -1
CDS:C54C6.2 3540057 3540412 -1
CDS:C54C6.2 3541428 3541593 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54C6.2.1 C54C6.2.1 2065   III: 3537642-3541639