WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48D5.1a Sequence Name  C48D5.1a
Length (nt)  1860   Chromosome Location  III: 3573699-3573740
Chromosome . Primary Identifier  III Chromosome Location . Start  3573699
Chromosome Location . End  3573740
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24859 NHR-6, isoform a 68.6 619 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00067025
WBRNAi00042734
WBRNAi00064804
WBRNAi00064841
WBRNAi00068806
WBRNAi00012102
WBRNAi00076224
WBRNAi00063660
WBRNAi00063661
WBRNAi00072186
WBRNAi00006029
WBRNAi00027856
WBRNAi00068744
WBRNAi00107540
WBRNAi00072185
WBRNAi00064584
WBRNAi00106637
WBRNAi00111913
WBRNAi00107442
WBRNAi00063682
WBRNAi00063687
WBRNAi00107363
WBRNAi00106714

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48D5.1a 3573699 3573740 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003605 nhr-6 C48D5.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48D5.1a 3573699 3573740 1
CDS:C48D5.1a 3573858 3573923 1
CDS:C48D5.1a 3574148 3574250 1
CDS:C48D5.1a 3574294 3574376 1
CDS:C48D5.1a 3576192 3576269 1
CDS:C48D5.1a 3576317 3576468 1
CDS:C48D5.1a 3576609 3576803 1
CDS:C48D5.1a 3576870 3577159 1
CDS:C48D5.1a 3577205 3577362 1
CDS:C48D5.1a 3577410 3577770 1
CDS:C48D5.1a 3577848 3577969 1
CDS:C48D5.1a 3578181 3578390 1

1 Sequence

Length
1860

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48D5.1a.1 C48D5.1a.1 2359   III: 3573581-3578771