WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B10.2a.2 Sequence Name  F13B10.2a.2
Length (nt)  1226   Chromosome Location  III: 3867854-3869503
Chromosome . Primary Identifier  III Chromosome Location . Start  3867854
Chromosome Location . End  3869503 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B10.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004414 rpl-3 F13B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B10.2a F13B10.2a 1206   III: 3867863-3868227

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13B10.2a.2 3867854 3869503 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83995   374   III: 3867854-3868227 Caenorhabditis elegans
Exon84000   136   III: 3868445-3868580 Caenorhabditis elegans
Exon84002   441   III: 3868629-3869069 Caenorhabditis elegans
Exon84004   266   III: 3869205-3869470 Caenorhabditis elegans
Exon84007   9   III: 3869495-3869503 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13B10.2a.2 3867854 3869503 1

1 Sequence

Length
1226

1 Sequence Ontology Term

Identifier Name Description
transcript