WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F13B10.1d Sequence Name  F13B10.1d
Length (nt)  1032   Chromosome Location  III: 3870183-3870268
Chromosome . Primary Identifier  III Chromosome Location . Start  3870183
Chromosome Location . End  3870268
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B10.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35712 TIR-1, isoform d 39.0 343 Caenorhabditis elegans
 

Other

46 RNAi

WormBase ID
WBRNAi00112044
WBRNAi00063698
WBRNAi00068001
WBRNAi00044472
WBRNAi00073457
WBRNAi00068809
WBRNAi00013188
WBRNAi00073459
WBRNAi00073458
WBRNAi00071903
WBRNAi00005993
WBRNAi00030869
WBRNAi00071257
WBRNAi00077209
WBRNAi00077213
WBRNAi00095256
WBRNAi00068749
WBRNAi00073460
WBRNAi00072252
WBRNAi00073455
WBRNAi00073456
WBRNAi00065513
WBRNAi00073454
WBRNAi00087265
WBRNAi00077205
WBRNAi00077231
WBRNAi00092952
WBRNAi00095436
WBRNAi00082213
WBRNAi00082212

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F13B10.1d 3870183 3870268 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006575 tir-1 F13B10.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F13B10.1d 3870183 3870268 -1
CDS:F13B10.1d 3870326 3870443 -1
CDS:F13B10.1d 3870600 3871427 -1

1 Sequence

Length
1032

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F13B10.1d.3 F13B10.1d.3 3669   III: 3869590-3873471
Transcript:F13B10.1d.1 F13B10.1d.1 3684   III: 3869592-3901625
Transcript:F13B10.1d.2 F13B10.1d.2 3383   III: 3869593-3882726