WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R74.3 Sequence Name  R74.3
Length (nt)  864   Chromosome Location  III: 4193983-4194231
Chromosome . Primary Identifier  III Chromosome Location . Start  4193983
Chromosome Location . End  4194231
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R74.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40514 XBP-1 33.3 287 Caenorhabditis elegans
 

Other

50 RNAi

WormBase ID
WBRNAi00068230
WBRNAi00052049
WBRNAi00078326
WBRNAi00017917
WBRNAi00076623
WBRNAi00005075
WBRNAi00063859
WBRNAi00077404
WBRNAi00077403
WBRNAi00034976
WBRNAi00077193
WBRNAi00065611
WBRNAi00093208
WBRNAi00093216
WBRNAi00093280
WBRNAi00093281
WBRNAi00093282
WBRNAi00093278
WBRNAi00093279
WBRNAi00093268
WBRNAi00093594
WBRNAi00093631
WBRNAi00093632
WBRNAi00093633
WBRNAi00108489
WBRNAi00063858
WBRNAi00065377
WBRNAi00115392
WBRNAi00084777
WBRNAi00087885

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R74.3 4193983 4194231 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006959 xbp-1 R74.3 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:R74.3 4193983 4194231 1
CDS:R74.3 4194282 4194760 1
CDS:R74.3 4194815 4194950 1

1 Sequence

Length
864

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R74.3.1 R74.3.1 1446   III: 4193809-4195358
Transcript:R74.3.2 R74.3.2 1357   III: 4193821-4195321