WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0285.6.1 Sequence Name  B0285.6.1
Length (nt)  1830   Chromosome Location  III: 4350099-4355979
Chromosome . Primary Identifier  III Chromosome Location . Start  4350099
Chromosome Location . End  4355979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007138 B0285.6 B0285.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0285.6 B0285.6 1725   III: 4350113-4350217

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0285.6.1 4350099 4355979 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85605   119   III: 4350099-4350217 Caenorhabditis elegans
Exon85612   150   III: 4352703-4352852 Caenorhabditis elegans
Exon85613   116   III: 4352895-4353010 Caenorhabditis elegans
Exon85614   36   III: 4353293-4353328 Caenorhabditis elegans
Exon85615   159   III: 4353377-4353535 Caenorhabditis elegans
Exon85616   44   III: 4353584-4353627 Caenorhabditis elegans
Exon85617   109   III: 4353672-4353780 Caenorhabditis elegans
Exon85618   228   III: 4353832-4354059 Caenorhabditis elegans
Exon85619   197   III: 4354267-4354463 Caenorhabditis elegans
Exon85620   122   III: 4354507-4354628 Caenorhabditis elegans
Exon85621   303   III: 4354675-4354977 Caenorhabditis elegans
Exon85622   247   III: 4355733-4355979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0285.6.1 4350099 4355979 1

1 Sequence

Length
1830

1 Sequence Ontology Term

Identifier Name Description
transcript