WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07G2.2b Sequence Name  C07G2.2b
Length (nt)  1383   Chromosome Location  III: 4492306-4492416
Chromosome . Primary Identifier  III Chromosome Location . Start  4492306
Chromosome Location . End  4492416
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G2.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19688 ATF-7, isoform b 49.7 460 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00040020
WBRNAi00040021
WBRNAi00040022
WBRNAi00028646
WBRNAi00095299
WBRNAi00093236
WBRNAi00006802
WBRNAi00094624
WBRNAi00007139

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07G2.2b 4492306 4492416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000223 atf-7 C07G2.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07G2.2b 4492306 4492416 -1
CDS:C07G2.2b 4492652 4492768 -1
CDS:C07G2.2b 4492810 4493101 -1
CDS:C07G2.2b 4493158 4493561 -1
CDS:C07G2.2b 4493679 4494092 -1
CDS:C07G2.2b 4498491 4498535 -1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07G2.2b.2 C07G2.2b.2 2083   III: 4491630-4498559
Transcript:C07G2.2b.1 C07G2.2b.1 2161   III: 4491630-4499043