WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.2.2 Sequence Name  F35G12.2.2
Length (nt)  2094   Chromosome Location  III: 4568797-4571865
Chromosome . Primary Identifier  III Chromosome Location . Start  4568797
Chromosome Location . End  4571865 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009440 idhg-1 F35G12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.2 F35G12.2 1191   III: 4569024-4569149

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.2.2 4568797 4571865 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86178   162   III: 4568797-4568958 Caenorhabditis elegans
Exon86179   137   III: 4569013-4569149 Caenorhabditis elegans
Exon86182   213   III: 4569192-4569404 Caenorhabditis elegans
Exon86184   129   III: 4569454-4569582 Caenorhabditis elegans
Exon86186   105   III: 4569634-4569738 Caenorhabditis elegans
Exon86188   213   III: 4569784-4569996 Caenorhabditis elegans
Exon86190   144   III: 4570073-4570216 Caenorhabditis elegans
Exon86192   189   III: 4570262-4570450 Caenorhabditis elegans
Exon86194   802   III: 4571064-4571865 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.2.2 4568797 4571865 1

1 Sequence

Length
2094

1 Sequence Ontology Term

Identifier Name Description
transcript