WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0393.5.1 Sequence Name  B0393.5.1
Length (nt)  3862   Chromosome Location  III: 4765774-4776342
Chromosome . Primary Identifier  III Chromosome Location . Start  4765774
Chromosome Location . End  4776342 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0393.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007170 B0393.5 B0393.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0393.5 B0393.5 3552   III: 4765833-4765908

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0393.5.1 4765774 4776342 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86765   135   III: 4765774-4765908 Caenorhabditis elegans
Exon86766   200   III: 4766325-4766524 Caenorhabditis elegans
Exon86769   133   III: 4769376-4769508 Caenorhabditis elegans
Exon86770   122   III: 4769557-4769678 Caenorhabditis elegans
Exon86772   728   III: 4770091-4770818 Caenorhabditis elegans
Exon86773   299   III: 4770980-4771278 Caenorhabditis elegans
Exon86774   194   III: 4771320-4771513 Caenorhabditis elegans
Exon86775   306   III: 4771647-4771952 Caenorhabditis elegans
Exon86776   148   III: 4772007-4772154 Caenorhabditis elegans
Exon86777   411   III: 4772198-4772608 Caenorhabditis elegans
Exon86778   240   III: 4772945-4773184 Caenorhabditis elegans
Exon86779   210   III: 4773394-4773603 Caenorhabditis elegans
Exon86780   153   III: 4774065-4774217 Caenorhabditis elegans
Exon86782   90   III: 4775186-4775275 Caenorhabditis elegans
Exon86783   88   III: 4775807-4775894 Caenorhabditis elegans
Exon86784   405   III: 4775938-4776342 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0393.5.1 4765774 4776342 1

1 Sequence

Length
3862

1 Sequence Ontology Term

Identifier Name Description
transcript