WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26E6.9b.1 Sequence Name  C26E6.9b.1
Length (nt)  2900   Chromosome Location  III: 4922427-4926100
Chromosome . Primary Identifier  III Chromosome Location . Start  4922427
Chromosome Location . End  4926100 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26E6.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004782 set-2 C26E6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26E6.9b C26E6.9b 2220   III: 4923002-4923157

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26E6.9b.1 4922427 4926100 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87254   731   III: 4922427-4923157 Caenorhabditis elegans
Exon87258   165   III: 4923211-4923375 Caenorhabditis elegans
Exon87261   111   III: 4923425-4923535 Caenorhabditis elegans
Exon87264   312   III: 4923583-4923894 Caenorhabditis elegans
Exon87267   228   III: 4923942-4924169 Caenorhabditis elegans
Exon87270   1008   III: 4924233-4925240 Caenorhabditis elegans
Exon87273   51   III: 4925687-4925737 Caenorhabditis elegans
Exon87275   294   III: 4925807-4926100 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26E6.9b.1 4922427 4926100 -1

1 Sequence

Length
2900

1 Sequence Ontology Term

Identifier Name Description
transcript