WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26E6.4.1 Sequence Name  C26E6.4.1
Length (nt)  3960   Chromosome Location  III: 4939567-4944404
Chromosome . Primary Identifier  III Chromosome Location . Start  4939567
Chromosome Location . End  4944404 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26E6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016140 rpb-2 C26E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26E6.4 C26E6.4 3585   III: 4939602-4939736

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26E6.4.1 4939567 4944404 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87399   170   III: 4939567-4939736 Caenorhabditis elegans
Exon87400   1128   III: 4939780-4940907 Caenorhabditis elegans
Exon87401   401   III: 4940953-4941353 Caenorhabditis elegans
Exon87402   289   III: 4941401-4941689 Caenorhabditis elegans
Exon87403   243   III: 4941763-4942005 Caenorhabditis elegans
Exon87404   543   III: 4942054-4942596 Caenorhabditis elegans
Exon87405   240   III: 4942830-4943069 Caenorhabditis elegans
Exon87406   246   III: 4943225-4943470 Caenorhabditis elegans
Exon87407   210   III: 4943519-4943728 Caenorhabditis elegans
Exon87408   490   III: 4943915-4944404 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26E6.4.1 4939567 4944404 1

1 Sequence

Length
3960

1 Sequence Ontology Term

Identifier Name Description
transcript