WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R144.1.1 Sequence Name  R144.1.1
Length (nt)  3045   Chromosome Location  III: 5030929-5036583
Chromosome . Primary Identifier  III Chromosome Location . Start  5030929
Chromosome Location . End  5036583 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R144.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002218 klp-6 R144.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R144.1 R144.1 2787   III: 5030949-5031188

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R144.1.1 5030929 5036583 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87688   260   III: 5030929-5031188 Caenorhabditis elegans
Exon87689   133   III: 5031240-5031372 Caenorhabditis elegans
Exon87692   409   III: 5032038-5032446 Caenorhabditis elegans
Exon87693   211   III: 5032838-5033048 Caenorhabditis elegans
Exon87694   56   III: 5033098-5033153 Caenorhabditis elegans
Exon87695   499   III: 5033399-5033897 Caenorhabditis elegans
Exon87696   217   III: 5034020-5034236 Caenorhabditis elegans
Exon87697   79   III: 5034296-5034374 Caenorhabditis elegans
Exon87698   70   III: 5034469-5034538 Caenorhabditis elegans
Exon87699   262   III: 5035204-5035465 Caenorhabditis elegans
Exon87700   419   III: 5035547-5035965 Caenorhabditis elegans
Exon87701   107   III: 5036091-5036197 Caenorhabditis elegans
Exon87702   323   III: 5036261-5036583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R144.1.1 5030929 5036583 1

1 Sequence

Length
3045

1 Sequence Ontology Term

Identifier Name Description
transcript