WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D2.3.1 Sequence Name  K10D2.3.1
Length (nt)  4802   Chromosome Location  III: 5173922-5180507
Chromosome . Primary Identifier  III Chromosome Location . Start  5173922
Chromosome Location . End  5180507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019629 cid-1 K10D2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D2.3 K10D2.3 4278   III: 5173992-5174073

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.3.1 5173922 5180507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87971   152   III: 5173922-5174073 Caenorhabditis elegans
Exon87972   458   III: 5174371-5174828 Caenorhabditis elegans
Exon87973   163   III: 5174949-5175111 Caenorhabditis elegans
Exon87974   308   III: 5175162-5175469 Caenorhabditis elegans
Exon87975   993   III: 5175632-5176624 Caenorhabditis elegans
Exon87976   534   III: 5176674-5177207 Caenorhabditis elegans
Exon87977   857   III: 5177290-5178146 Caenorhabditis elegans
Exon87978   109   III: 5178659-5178767 Caenorhabditis elegans
Exon87979   412   III: 5178817-5179228 Caenorhabditis elegans
Exon87980   211   III: 5179560-5179770 Caenorhabditis elegans
Exon87981   121   III: 5179816-5179936 Caenorhabditis elegans
Exon87982   484   III: 5180024-5180507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.3.1 5173922 5180507 1

1 Sequence

Length
4802

1 Sequence Ontology Term

Identifier Name Description
transcript