WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC395.2.1 Sequence Name  ZC395.2.1
Length (nt)  740   Chromosome Location  III: 5277894-5279344
Chromosome . Primary Identifier  III Chromosome Location . Start  5277894
Chromosome Location . End  5279344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC395.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000536 clk-1 ZC395.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC395.2 ZC395.2 564   III: 5277894-5278029

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC395.2.1 5277894 5279344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88314   136   III: 5277894-5278029 Caenorhabditis elegans
Exon88315   141   III: 5278477-5278617 Caenorhabditis elegans
Exon88316   96   III: 5278702-5278797 Caenorhabditis elegans
Exon88317   113   III: 5278858-5278970 Caenorhabditis elegans
Exon88318   254   III: 5279091-5279344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC395.2.1 5277894 5279344 1

1 Sequence

Length
740

1 Sequence Ontology Term

Identifier Name Description
transcript