WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32H12A.8a.1 Sequence Name  Y32H12A.8a.1
Length (nt)  11878   Chromosome Location  III: 5385513-5404985
Chromosome . Primary Identifier  III Chromosome Location . Start  5385513
Chromosome Location . End  5404985 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32H12A.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021316 Y32H12A.8 Y32H12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32H12A.8a Y32H12A.8a 11550   III: 5385838-5385906

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8a.1 5385513 5404985 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88575   394   III: 5385513-5385906 Caenorhabditis elegans
Exon88580   639   III: 5386049-5386687 Caenorhabditis elegans
Exon88586   351   III: 5386844-5387194 Caenorhabditis elegans
Exon88596   305   III: 5387347-5387651 Caenorhabditis elegans
Exon88606   518   III: 5388118-5388635 Caenorhabditis elegans
Exon88612   137   III: 5388693-5388829 Caenorhabditis elegans
Exon88618   258   III: 5388884-5389141 Caenorhabditis elegans
Exon88624   1056   III: 5389429-5390484 Caenorhabditis elegans
Exon88630   150   III: 5390615-5390764 Caenorhabditis elegans
Exon88636   341   III: 5391071-5391411 Caenorhabditis elegans
Exon88642   749   III: 5391520-5392268 Caenorhabditis elegans
Exon88648   107   III: 5392412-5392518 Caenorhabditis elegans
Exon88654   350   III: 5392621-5392970 Caenorhabditis elegans
Exon88660   76   III: 5393016-5393091 Caenorhabditis elegans
Exon88666   721   III: 5393397-5394117 Caenorhabditis elegans
Exon88673   219   III: 5394247-5394465 Caenorhabditis elegans
Exon88679   75   III: 5394518-5394592 Caenorhabditis elegans
Exon88685   143   III: 5394807-5394949 Caenorhabditis elegans
Exon88695   1194   III: 5394996-5396189 Caenorhabditis elegans
Exon88701   393   III: 5396469-5396861 Caenorhabditis elegans
Exon88707   1085   III: 5397340-5398424 Caenorhabditis elegans
Exon88713   236   III: 5398544-5398779 Caenorhabditis elegans
Exon88719   190   III: 5399157-5399346 Caenorhabditis elegans
Exon88725   216   III: 5399652-5399867 Caenorhabditis elegans
Exon88731   110   III: 5399919-5400028 Caenorhabditis elegans
Exon88737   330   III: 5400135-5400464 Caenorhabditis elegans
Exon88743   452   III: 5400746-5401197 Caenorhabditis elegans
Exon88749   179   III: 5401596-5401774 Caenorhabditis elegans
Exon88755   115   III: 5402003-5402117 Caenorhabditis elegans
Exon88761   109   III: 5402166-5402274 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8a.1 5385513 5404985 -1

1 Sequence

Length
11878

1 Sequence Ontology Term

Identifier Name Description
transcript