WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E7.2.4 Sequence Name  F54E7.2.4
Length (nt)  488   Chromosome Location  III: 5679298-5680181
Chromosome . Primary Identifier  III Chromosome Location . Start  5679298
Chromosome Location . End  5680181 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E7.2.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004481 rps-12 F54E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E7.2 F54E7.2 423   III: 5679330-5679346

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.2.4 5679298 5680181 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89650   49   III: 5679298-5679346 Caenorhabditis elegans
Exon89656   138   III: 5679576-5679713 Caenorhabditis elegans
Exon89658   301   III: 5679881-5680181 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.2.4 5679298 5680181 1

1 Sequence

Length
488

1 Sequence Ontology Term

Identifier Name Description
transcript