WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0336.9e Sequence Name  B0336.9e
Length (nt)  225   Chromosome Location  III: 5704615-5704620
Chromosome . Primary Identifier  III Chromosome Location . Start  5704615
Chromosome Location . End  5704620
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.9e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31146 SWP-1, isoform e 8.6 74 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00027627

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0336.9e 5704615 5704620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006359 swp-1 B0336.9 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0336.9e 5704615 5704620 -1
CDS:B0336.9e 5704708 5704747 -1
CDS:B0336.9e 5705198 5705325 -1
CDS:B0336.9e 5705411 5705461 -1

1 Sequence

Length
225

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0336.9e.2 B0336.9e.2 2394   III: 5702256-5705466
Transcript:B0336.9e.3 B0336.9e.3 2427   III: 5702263-5705466
Transcript:B0336.9e.1 B0336.9e.1 571   III: 5704122-5705464