WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0336.11b.1 Sequence Name  B0336.11b.1
Length (nt)  1291   Chromosome Location  III: 5706717-5708296
Chromosome . Primary Identifier  III Chromosome Location . Start  5706717
Chromosome Location . End  5708296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015148 hpo-28 B0336.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0336.11b B0336.11b 945   III: 5706752-5707179

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0336.11b.1 5706717 5708296 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89815   463   III: 5706717-5707179 Caenorhabditis elegans
Exon89818   200   III: 5707232-5707431 Caenorhabditis elegans
Exon89820   176   III: 5707477-5707652 Caenorhabditis elegans
Exon89822   452   III: 5707845-5708296 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0336.11b.1 5706717 5708296 -1

1 Sequence

Length
1291

1 Sequence Ontology Term

Identifier Name Description
transcript