WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0336.11a Sequence Name  B0336.11a
Length (nt)  1704   Chromosome Location  III: 5706752-5707179
Chromosome . Primary Identifier  III Chromosome Location . Start  5706752
Chromosome Location . End  5707179
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39202 HPO-28, isoform a 65.8 567 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00038940
WBRNAi00009711
WBRNAi00005271
WBRNAi00028093
WBRNAi00088768
WBRNAi00088661
WBRNAi00081124

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0336.11a 5706752 5707179 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015148 hpo-28 B0336.11 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0336.11a 5706752 5707179 -1
CDS:B0336.11a 5707232 5707431 -1
CDS:B0336.11a 5707477 5707652 -1
CDS:B0336.11a 5707845 5708003 -1
CDS:B0336.11a 5708279 5708404 -1
CDS:B0336.11a 5708516 5708626 -1
CDS:B0336.11a 5708672 5708820 -1
CDS:B0336.11a 5708872 5708955 -1
CDS:B0336.11a 5709008 5709170 -1
CDS:B0336.11a 5709216 5709323 -1

1 Sequence

Length
1704

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0336.11a.1 B0336.11a.1 1740   III: 5706717-5709324