WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.6.1 Sequence Name  F01F1.6.1
Length (nt)  1826   Chromosome Location  III: 5857209-5859179
Chromosome . Primary Identifier  III Chromosome Location . Start  5857209
Chromosome Location . End  5859179 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.6 F01F1.6 1596   III: 5857209-5857415

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.6.1 5857209 5859179 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90225   207   III: 5857209-5857415 Caenorhabditis elegans
Exon90226   458   III: 5857465-5857922 Caenorhabditis elegans
Exon90228   726   III: 5857971-5858696 Caenorhabditis elegans
Exon90230   435   III: 5858745-5859179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.6.1 5857209 5859179 1

1 Sequence

Length
1826

1 Sequence Ontology Term

Identifier Name Description
transcript