WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.5.1 Sequence Name  F01F1.5.1
Length (nt)  2086   Chromosome Location  III: 5859308-5861908
Chromosome . Primary Identifier  III Chromosome Location . Start  5859308
Chromosome Location . End  5861908 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001057 dpf-4 F01F1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.5 F01F1.5 1932   III: 5859632-5859990

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.5.1 5859308 5861908 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90232   38   III: 5859308-5859345 Caenorhabditis elegans
Exon90233   378   III: 5859613-5859990 Caenorhabditis elegans
Exon90235   499   III: 5860048-5860546 Caenorhabditis elegans
Exon90237   617   III: 5860684-5861300 Caenorhabditis elegans
Exon90239   554   III: 5861355-5861908 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.5.1 5859308 5861908 1

1 Sequence

Length
2086

1 Sequence Ontology Term

Identifier Name Description
transcript