WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B5.7d.1 Sequence Name  F25B5.7d.1
Length (nt)  1125   Chromosome Location  III: 5955038-5958215
Chromosome . Primary Identifier  III Chromosome Location . Start  5955038
Chromosome Location . End  5958215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017778 nono-1 F25B5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B5.7d F25B5.7d 1125   III: 5955038-5955293

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.7d.1 5955038 5958215 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90554   256   III: 5955038-5955293 Caenorhabditis elegans
Exon90559   96   III: 5955888-5955983 Caenorhabditis elegans
Exon90561   302   III: 5956533-5956834 Caenorhabditis elegans
Exon90564   355   III: 5957692-5958046 Caenorhabditis elegans
Exon90565   116   III: 5958100-5958215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.7d.1 5955038 5958215 -1

1 Sequence

Length
1125

1 Sequence Ontology Term

Identifier Name Description
transcript