WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.4i.1 Sequence Name  Y42G9A.4i.1
Length (nt)  2837   Chromosome Location  III: 6124159-6136139
Chromosome . Primary Identifier  III Chromosome Location . Start  6124159
Chromosome Location . End  6136139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.4i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.4i Y42G9A.4i 2151   III: 6124845-6125020

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4i.1 6124159 6136139 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91055   862   III: 6124159-6125020 Caenorhabditis elegans
Exon91085   154   III: 6125493-6125646 Caenorhabditis elegans
Exon91115   135   III: 6126670-6126804 Caenorhabditis elegans
Exon91143   60   III: 6127038-6127097 Caenorhabditis elegans
Exon91171   214   III: 6127610-6127823 Caenorhabditis elegans
Exon91198   49   III: 6127873-6127921 Caenorhabditis elegans
Exon91237   127   III: 6129342-6129468 Caenorhabditis elegans
Exon91264   139   III: 6129912-6130050 Caenorhabditis elegans
Exon91284   279   III: 6130212-6130490 Caenorhabditis elegans
Exon91305   305   III: 6130781-6131085 Caenorhabditis elegans
Exon91335   161   III: 6131587-6131747 Caenorhabditis elegans
Exon91354   327   III: 6132778-6133104 Caenorhabditis elegans
Exon91364   25   III: 6136115-6136139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4i.1 6124159 6136139 -1

1 Sequence

Length
2837

1 Sequence Ontology Term

Identifier Name Description
transcript