WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.4p.1 Sequence Name  Y42G9A.4p.1
Length (nt)  1734   Chromosome Location  III: 6124845-6131682
Chromosome . Primary Identifier  III Chromosome Location . Start  6124845
Chromosome Location . End  6131682 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.4p.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.4p Y42G9A.4p 1734   III: 6124845-6125020

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4p.1 6124845 6131682 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91068   176   III: 6124845-6125020 Caenorhabditis elegans
Exon91092   154   III: 6125493-6125646 Caenorhabditis elegans
Exon91122   135   III: 6126670-6126804 Caenorhabditis elegans
Exon91150   60   III: 6127038-6127097 Caenorhabditis elegans
Exon91178   214   III: 6127610-6127823 Caenorhabditis elegans
Exon91205   49   III: 6127873-6127921 Caenorhabditis elegans
Exon91244   127   III: 6129342-6129468 Caenorhabditis elegans
Exon91271   139   III: 6129912-6130050 Caenorhabditis elegans
Exon91288   279   III: 6130212-6130490 Caenorhabditis elegans
Exon91312   305   III: 6130781-6131085 Caenorhabditis elegans
Exon91324   96   III: 6131587-6131682 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4p.1 6124845 6131682 -1

1 Sequence

Length
1734

1 Sequence Ontology Term

Identifier Name Description
transcript